Tag Archives: NASA

Who’s who in the Zoo – Marianne Barrier

In this edition of Who’s who in the Zoo, meet Marianne Barrier, who is part of the Monkey Health Explorer team.


Who: Marianne Barrier, Lab Manager, Genomics & Microbiology Research Lab

Location: North Carolina Museum of Natural Sciences, Raleigh, NC, USA

Zooniverse project: Monkey Health Explorer

What is your research about?

I’m actually trained in genetics and using DNA as a tool, so I’ve had to expand my knowledge to other areas as we set up our Monkey Health Explorer project. This project is one piece of a larger puzzle being assembled by a collaborative group of scientists all studying different aspects of a colony of Rhesus macaque monkeys living on an island off the coast of Puerto Rico. Our piece involves examining the blood of these monkeys to get a snapshot of their health, just like when we have our blood drawn at a doctor’s office. The data we collect about the blood cells is then examined alongside data from other researchers, such as behavioral or gene expression data, to tell more about each monkey.

How do Zooniverse volunteers contribute to your research?

The primary focus of our project is to count the 5 types of white blood cells in blood smears in order to determine if these numbers are in the “normal” ranges for a healthy monkey or if they might indicate the monkey is sick. Our volunteers learn about the visual features of each type of white blood cell and contribute to our research by identifying the white blood cells in blood smear images from our monkeys. We then summarize the results from all volunteers to give us the white blood cell counts for each monkey sample.

In addition to helping us identify these cells, we have several volunteers who are trained cell professionals or medical or veterinary students who have given us additional insights into our monkeys. They have pointed out unique patterns in the cells that indicate specific illnesses, such as parasitic infections.

What’s a surprising or fun fact about your research field?

Rhesus macaque blood cells look very similar to human blood cells. I learned how to identify the cells in our project using training materials for human blood.

The “positive” and “negative” part of our blood types is called the “Rh factor” because that particular type of blood protein was first identified in Rhesus macaque monkeys.

What first got you interested in research?

I’ve always loved learning how things work and was a big fan of the TV show MacGyver because he could figure out how to resolve a problem by using items he had around him. This inspired me to think about how to approach a problem from multiple views and come up with potential solutions using standard and non-standard methods.

What’s something people might not expect about your job or daily routine?

The lab I work in is inside of a Museum and has glass walls, so visitors can watch us work. Sometimes when I step outside the lab, I end up talking with visitors about what we’re doing and answering their questions about what they can see, such as our DNA sequencers and liquid handling robot. We also have special events at the Museum where I have the opportunity to share about our Monkey Health Explorer project to visitors and also host teacher training workshops to show them how to incorporate our project into their classroom with the educational materials we’ve developed.

Outside of work, what do you enjoy doing?

My love of learning extends to everything – I read/listen to audiobooks (mysteries lately), have 3 languages going on Duolingo (French, Spanish, German), rotate between crafty hobbies (painting, drawing, knitting, 3D print design), play multiple instruments (learning drums now), and recently added 2 bee hives to our garden.

What are you favourite citizen science projects?

I do love adding photos to iNaturalist as I come across new (to me) creatures and plants as I explore outside.

What guidance would you give to other researchers considering creating a citizen research project?

I would suggest spending time exploring several projects that have similarities to what you’re thinking of designing and use these as guides to consider what type of information you want to get from your project and how best to design training to make it interesting and accessible to volunteers. Also, make use of the Zooniverse Talk to interact with other project researchers to gain insights and learn from them. It’s a great community with a wealth of knowledge and experience!

Who’s who in the Zoo – Ameenat Lola Solebo

In this edition of Who’s who in the Zoo, meet Ameenat Lola Solebo who leads Eyes on Eyes ; a Zooniverse project that aims to improve how we monitor children with a blinding eye disorder.


Who: Ameenat Lola Solebo, Clinician Scientist (Paediatric Ophthalmology / Epidemiology & Health Data Science)

Location: UCL GOS Institute of Child Health and Great Ormond Street Hospital

Zooniverse project: Eyes on Eyes

What is your research about?

We’re asking Zooniverse volunteers to label eye images of children with or at risk of a blinding disease called uveitis. Early detection of uveitis means less chance of blindness, but it is becoming increasingly difficult for children to access the specialised experts they need to detect uveitis at an early stage (before the uveitis has caused damage in side the eye). New ‘OCT’ (eye cameras) may provide detailed enough images of the eye to allow even non specialists to detect uveitis at the early stages. Our research studies develop and evaluate OCT methods for uveitis detection and monitoring in children, and during these studies we collect a lot of data from children’s eyes – sometimes several hundred scans in different positions just from one child. We are hoping that we don’t need to keep on collecting this many images in the long run, but we have to know where and how best to look for problems.

How do Zooniverse volunteers contribute to your research?

Zooniverse volunteers are asked to label scans in different ways. They can tell us what they think of the quality of an individual scan – is it good enough to be useful? They can point out which features of the scan are making it poorer quality so that we can judge how useful it might be. They can draw regions of interest on the scan, helping to focus attention. They can also pick up the signs of uveitis – inflammatory cells floating around in the usually dark space inside the eye, looking like bright stars in a dark sky. They can tell us if they can see cells, how many cells they can see, and they can locate each cell for us. The quality judgements submitted by the volunteers have compared favourably to expert judgement, which is great. We have since developed a quality assessment algorithm based on labels from the Zooniverse volunteers. We are now looking to just how accurate the volunteer assessments of the images are compared to the clinical diagnosis of the child.

What’s a surprising fact about your research field?

Uveitis is often autoimmune, meaning your body turns against the delicate tissues in your eye — especially the uvea, a highly vascular layer that includes the iris. It’s like friendly fire… which is such an awful term, isn’t it?

What first got you interested in research?

I was tired of answering “we don’t know” when parents asked us questions about their child’s eye disease.

What’s something people might not expect about your job or daily routine?

Someone asked me how I put back the eye after doing eye surgery – ophthalmic surgeons do not, I repeat do not remove the eye from patients to operate on them! Also – I think that people may be surprised about how beautiful the eye looks when viewed at high mag. Ophthalmologists use a microscope called a slit lamp to look at and into a patient’s eye. The globe is such a fragile, well constructed, almost mystical body part, and vision is practically magic!

Outside of work, what do you enjoy doing?

I recently started karate. I am by far the oldest white belt and I am really loving making the KIAI! noises.

What are you favourite citizen science projects?

The Etch A Cell projects, because I learnt so much how to run my own project from that team and Black hole hunters, because they are great at describing what they have done with volunteer data.

What guidance would you give to other researchers considering creating a citizen research project?

Do it! And do it on Zooniverse, because the community is super engaged and the back of house team are so supportive. Stay active on talk boards to engage volunteers. And test, refine, test, refine your project until you start seeing it in your sleep.

And finally…

Thank you to all the volunteers who have been helping us!

Who’s who in the Zoo – Dr Travis Rector

Ever wondered what a Herbig-Haro object is? Find out in our latest edition of Who’s who in the Zoo with Dr. Travis Rector!


Who: Dr. Travis Rector, Professor

Location: University of Alaska Anchorage

Zooniverse project: Baby Star Search

What is your research about?

We are looking for Herbig-Haro (HH) objects, which are jets of gas produced by newly-forming protostars. They are important because they can show us where stars are forming right now. HH objects are quite beautiful and rare – only about a thousand of them are known to exist!

How do Zooniverse volunteers contribute to your research?

We are searching for HH objects in giant clouds of gas inside our galaxy using the Dark Energy Camera (DECam) on the Blanco 4-meter telescope at the Cerro Tololo Interamerican Observatory in Chile. The images produced by this camera are huge – 570 megapixels each – and are too big for a single person to look at. That’s where Zooniverse came in. We divided each image into smaller, 512×512, “cutouts” for people to search. We’ve completed the analysis and Zooniverse volunteers found 169 new HH objects! Considering only about 1200 were known to exist before this is a big increase.

What’s a surprising or fun fact about your research field?

Jets of gas occur in our universe on a wide range of scales. All of them are produced when gas is swirling around a central object. In the case of Herbig-Haro objects the jets are produced by gas moving around a protostar. These jets can extend over several light years. Jets are also produced by gas swirling around black holes. In quasars, these jets are powered by “supermassive” black holes and the jets produced can extend for several hundred thousand light years. What’s amazing is how similar all these jets are to each other despite the tremendous differences in size.

What first got you interested in research?

I first started doing research on quasar jets with Dr. David Hough when I was an undergraduate student at Trinity University.

What’s something people might not expect about your job or daily routine?

People often imagine that astronomers sit inside a dome every night looking through a telescope. In reality the telescopes we use have digital cameras and instruments that collect the data. Nowadays we can operate most telescopes remotely. So most of my research right now is done with telescopes in Chile that I can operate with my laptop computer from the comfort of my kitchen!

Outside of work, what do you enjoy doing?

One of my hobbies is turning the data we get from our telescopes into color images. They’re a great way to share the beauty of the universe, and share the research that we do. I’ve been doing this for over 25 years now, and most of these images are available in the NOIRLab image gallery. Living in Alaska I love to do a wide range of outdoor activities, but my passion is for snow. In particular I love to cross-country ski.

What are you favourite citizen science projects?

For years I’ve had my students to the Planet Hunters TESS project.

What guidance would you give to other researchers considering creating a citizen research project?

It was a lot easier than I had imagined it would be to set up. Zooniverse is great about helping out, and beta testers also had a lot of important feedback. Once your project is up and running be prepared for a tsunami of enthusiastic volunteers who will have a lot of questions. We also had several volunteers to translate our project into other languages, which was great for increasing participation.

And finally…

Here’s one of our color images of one of the regions we studied looking for Herbig Haro objects (you can read more about this here).

A celestial shadow known as the Circinus West molecular cloud

Disk Detective

Disk Detective

Today we’ve launched Disk Detective: a new project that asks you to help scour infrared data from NASA’s WISE spacecraft. WISE is a NASA mission surveying the whole sky in infrared. Disk Detective is backed by a team of astronomers that need your help to look at data of stars to try and find dusty debris disks – similar to our asteroid field. These disks suggest that these stars are in the early stages of forming planetary systems.

Learning more about these stars can tell researchers how our Solar System formed. Computers often confuse debris disks around stars with other astronomical objects. The Disk Detective team need your help to sort out what stars actually have these disks from galaxies and nebulae.

Screenshot Disk Detective

To take part you have to look through flipbook-style sets of images made up of multiple wavelength data from each star. You watch the object change as you move from shorter, optical wavelengths to longer infrared wavelength data. For each star you’re looking at data from multiple surveys and missions taken over many years. Bring all this data together, on the web, is a really cool part of Disk Detective.

There’s lots of data to get through and the science promises to be really interesting. Follow along on the Disk Detective blog, on Twitter and on Facebook too. In the meantime jump on the new site and have a go at www.diskdetective.org.

A Brand New Milky Way Project

The Milky Way Project (MWP) is complete. It took about three years and 50,000 volunteers have trawled all our images multiple times and drawn more than 1,000,000 bubbles and several million other objects, including star clusters, green knots, and galaxies. We have produced several papers already and more are on the way. It’s been a huge success but: there’s even more data!

And so it is with glee that we announce the brand new Milky Way Project! It’s got more data, more objects to find, and it’s even more gorgeous.

The new MWP is being launched to include data from different regions of the galaxy in a new infrared wavelength combination. The new data consists of Spitzer/IRAC images from two surveys: Vela-Carina, which is essentially an extension of GLIMPSE covering Galactic longitudes 255°–295°, and GLIMPSE 3D, which extends GLIMPSE 1+2 to higher Galactic latitudes (at selected longitudes only). The images combine 3.6, 4.5, and 8.0 µm in the “classic” Spitzer/IRAC color scheme.  There are roughly 40,000 images to go through.

An EGO shines below a bright star cluster
An EGO shines below a bright star cluster

The latest Zooniverse technology and design is being brought to bear on this big data problem. We are using our newest features to retire images with nothing in them (as determined by the volunteers of course) and to give more screen time to those parts of the galaxy where there are lots of pillars, bubbles and clusters – as well as other things. We’re marking more objects –  bow shocks, pillars, EGOs  – and getting rid of some older ones that either aren’t visible in the new data or weren’t as scientifically useful as we’d hoped (specifically: red fuzzies and green knots).

Screenshot 2013-12-11 21.46.46

We’ve also upgraded to the newest version of Talk, and have kept all your original comments so you can still see the previous data and the objects that were found there. The new Milky Way Project is teeming with more galaxies, stars clusters and unknown objects than the original MWP.

It’s very exciting! There are tens of thousands of images from the Spitzer Space Telescope to look through. By telling us what you see in this infrared data, we can better understand how stars form. Dive in now and start classifying at www.milkywayproject.org – we need your help to map and measure our galaxy.

Planet Hunters

We are pleased to announce the debut of (another!) new Zooniverse project: Planet Hunters! This time we want you to help us find planets around other stars (exoplanets) using data from NASA’s Kepler mission.

Planet&SunSmall-2

NASA’s Kepler spacecraft is one of the most powerful tools in the hunt for extrasolar planets. The Kepler data set is unprecedented and has incredible photometric precision. Before Kepler, the only star monitored this precisely was our own Sun. The lightcurves reveal subtle variability that has never before been documented. Kepler lightcurves are were made publicly available with the first data release this past June and the next release scheduled for February 2011. We are very excited here at Planet Hunters to get our hands on them!

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The Kepler Team computers are sifting through the data, but we at Planet Hunters are betting that there will be planets which can only be found via the remarkable human ability for pattern recognition. This is a gamble, a bet, if you will, on the ability of humans to beat machines just occasionally. It may be that no new planets are found or that computers have the job down to a fine art. That’s ok. For science to progress sometimes we have to do experiments, and although it may not seem like it at the time negative results are as valuable as positive ones. Most of the lightcurves will be flat, devoid of transit signals but it’s possible that you might be the first to know that a star somewhere out there in the Milky Way has a companion, just as our Sun does.

Fancy giving it a try? If you do, you could be the first to spot an new planet – it may be a Jupiter-size behemoth or even an Earth-sized rock. If you want to take part in our amazing experiment you’ll be playing with cutting-edge web technology. You’ll need one of the most modern browsers around (Safari, Chrome, Firefox or Opera) and you’ll need an up-to-date version if possible. We are testing the limits of citizen science on the web and hope that you’ll come along for the ride. We hope to bring support for older browsers in early 2011.

So, come join our adventure and log on to Planet Hunters now!

Moon Zoo is Live

moon

No spacesuit or rocket ship is required! Moon Zoo allows you to explore the Moon’s surface in unprecedented detail – and help scientists along the way. New high-resolution images, taken by NASA’s Lunar Reconnaissance Orbiter Camera (LROC), offer exciting clues to unveil or reveal the history of the moon and our solar system. You can help us to organise and understand these images.

“We need Web users around the world to help us interpret these stunning new images of the lunar surface,” said Chris Lintott of Oxford University and chair of the Citizen Science Alliance. “If you only spend five minutes on the site counting craters you’ll be making a valuable contribution to science and, who knows, you might run across a Russian spacecraft.”

Scientists are particularly interested in knowing how many craters appear in a particular region of the moon in order to determine the age and depth of the lunar surface (regolith). Fresh craters left by recent impacts provide clues about the potential risks from meteor strikes on the moon and on Earth.

“We hope to address key questions about the impact bombardment history of the moon and discover sites of geological interest that have never been seen before,” said Katherine Joy of the Lunar and Planetary Institute and a Moon Zoo science team member.

So go and start exploring the Moon! Take a look at the tutorial to learn how it works and then begin getting up-close an personal with our closest astronomical neighbour.

For more information about Moon Zoo, visit: http://www.moonzoo.org. For more information about the NASA Lunar Science Institute, visit: http://www.lunarscience.nasa.gov. For more information about LRO and LROC, visit: http://www.nasa.gov/lro and http://www.lroc.sese.asu.edu/